IL_7ZUW_188
3D structure
- PDB id
- 7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- CCAAAUGCCUCG*CGCG
- Length
- 16 nucleotides
- Bulged bases
- 7ZUW|1|5|A|2282, 7ZUW|1|5|C|2288, 7ZUW|1|5|C|2307
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZUW_188 not in the Motif Atlas
- Geometric match to IL_5TBW_090
- Geometric discrepancy: 0.093
- The information below is about IL_5TBW_090
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_66080.1
- Basepair signature
- cWW-cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7ZUW|1|5|C|2278
7ZUW|1|5|C|2279
7ZUW|1|5|A|2280
7ZUW|1|5|A|2281
7ZUW|1|5|A|2282
7ZUW|1|5|U|2283
7ZUW|1|5|G|2284
7ZUW|1|5|C|2285
7ZUW|1|5|C|2286
7ZUW|1|5|U|2287
7ZUW|1|5|C|2288
7ZUW|1|5|G|2289
*
7ZUW|1|5|C|2305
7ZUW|1|5|G|2306
7ZUW|1|5|C|2307
7ZUW|1|5|G|2308
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Bm
- 60S ribosomal protein L41
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