IL_7ZUW_206

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CUC*GUGAG

Length

8 nucleotides

Bulged bases

7ZUW|1|5|G|2946, 7ZUW|1|5|A|2947

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_206 not in the Motif Atlas

Homologous match to IL_8C3A_116

Geometric discrepancy: 0.0666

The information below is about IL_8C3A_116

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

7ZUW|1|5|C|2880
7ZUW|1|5|U|2881
7ZUW|1|5|C|2882
*
7ZUW|1|5|G|2944
7ZUW|1|5|U|2945
7ZUW|1|5|G|2946
7ZUW|1|5|A|2947
7ZUW|1|5|G|2948

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BB

60S ribosomal protein L3

Chain BU

60S ribosomal protein L23-A