IL_7ZUW_226

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CUUG*CUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_226 not in the Motif Atlas

Geometric match to IL_6MWN_005

Geometric discrepancy: 0.1369

The information below is about IL_6MWN_005

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7ZUW|1|5|C|3236
7ZUW|1|5|U|3237
7ZUW|1|5|U|3238
7ZUW|1|5|G|3239
*
7ZUW|1|5|C|3250
7ZUW|1|5|U|3251
7ZUW|1|5|U|3252
7ZUW|1|5|G|3253

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BN

60S ribosomal protein L16-A