IL_7ZUW_244

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

UCAAC*GGA

Length

8 nucleotides

Bulged bases

7ZUW|1|5|G|1515

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUW_244 not in the Motif Atlas

Homologous match to IL_8P9A_290

Geometric discrepancy: 0.1286

The information below is about IL_8P9A_290

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.12

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

22

Unit IDs

7ZUW|1|5|U|1502
7ZUW|1|5|C|1503
7ZUW|1|5|A|1504
7ZUW|1|5|A|1505
7ZUW|1|5|C|1506
*
7ZUW|1|5|G|1514
7ZUW|1|5|G|1515
7ZUW|1|5|A|1516

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BO

60S ribosomal protein L17-A

Chain BQ

60S ribosomal protein L19-A

Chain Bk

60S ribosomal protein L39