IL_7ZUX_034

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GUUAAAA*UC

Length

9 nucleotides

Bulged bases

7ZUX|1|2|A|619

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_034 not in the Motif Atlas

Homologous match to IL_4V88_416

Geometric discrepancy: 0.1486

The information below is about IL_4V88_416

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.3

Basepair signature

cWW-L-cWW-R-L-R

Number of instances in this motif group

5

Unit IDs

7ZUX|1|2|G|616
7ZUX|1|2|U|617
7ZUX|1|2|U|618
7ZUX|1|2|A|619
7ZUX|1|2|A|620
7ZUX|1|2|A|621
7ZUX|1|2|A|622
*
7ZUX|1|2|U|1104
7ZUX|1|2|C|1105

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain DX

40S ribosomal protein S23-A

Chain Da

40S ribosomal protein S26-B