IL_7ZUX_162
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GUAGUAG*CGAAAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ZUX_162 not in the Motif Atlas
- Homologous match to IL_5TBW_061
- Geometric discrepancy: 0.066
- The information below is about IL_5TBW_061
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_76042.3
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
7ZUX|1|5|G|1445
7ZUX|1|5|U|1446
7ZUX|1|5|A|1447
7ZUX|1|5|G|1448
7ZUX|1|5|U|1449
7ZUX|1|5|A|1450
7ZUX|1|5|G|1451
*
7ZUX|1|5|C|2355
7ZUX|1|5|G|2356
7ZUX|1|5|A|2357
7ZUX|1|5|A|2358
7ZUX|1|5|A|2359
7ZUX|1|5|C|2360
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain EC
- 60S ribosomal protein L4-A
- Chain EO
- 60S ribosomal protein L17-A
Coloring options: