3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
GUA*UUAAGC
Length
9 nucleotides
Bulged bases
7ZUX|1|5|G|3378
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ZUX_235 not in the Motif Atlas
Homologous match to IL_8C3A_138
Geometric discrepancy: 0.0741
The information below is about IL_8C3A_138
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_84428.1
Basepair signature
cWW-cWW-L-cWW-L
Number of instances in this motif group
2

Unit IDs

7ZUX|1|5|G|3329
7ZUX|1|5|U|3330
7ZUX|1|5|A|3331
*
7ZUX|1|5|U|3374
7ZUX|1|5|U|3375
7ZUX|1|5|A|3376
7ZUX|1|5|A|3377
7ZUX|1|5|G|3378
7ZUX|1|5|C|3379

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EB
60S ribosomal protein L3
Chain EV
60S ribosomal protein L24-A
Chain Ec
60S ribosomal protein L31-A

Coloring options:


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