IL_7ZUX_247

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UCAAC*GGA

Length

8 nucleotides

Bulged bases

7ZUX|1|5|G|1515

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZUX_247 not in the Motif Atlas

Homologous match to IL_8C3A_482

Geometric discrepancy: 0.0956

The information below is about IL_8C3A_482

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_04395.1

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

3

Unit IDs

7ZUX|1|5|U|1502
7ZUX|1|5|C|1503
7ZUX|1|5|A|1504
7ZUX|1|5|A|1505
7ZUX|1|5|C|1506
*
7ZUX|1|5|G|1514
7ZUX|1|5|G|1515
7ZUX|1|5|A|1516

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EO

60S ribosomal protein L17-A

Chain EQ

60S ribosomal protein L19-A

Chain Ek

60S ribosomal protein L39