IL_8C3A_482

3D structure

PDB id

8C3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UCAAC*GGA

Length

8 nucleotides

Bulged bases

8C3A|1|1|G|1510

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_04395.1

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

3

Unit IDs

8C3A|1|1|U|1497
8C3A|1|1|C|1498
8C3A|1|1|A|1499
8C3A|1|1|A|1500
8C3A|1|1|C|1501
*
8C3A|1|1|G|1509
8C3A|1|1|G|1510
8C3A|1|1|A|1511

Current chains

Chain 1

25S

Nearby chains

Chain AM

60S ribosomal protein L39

Chain x

Ribosomal protein L22

Chain z

60S ribosomal protein L19-A