IL_7ZW0_166

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AAUAAUG*CUAU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_166 not in the Motif Atlas

Homologous match to IL_8C3A_080

Geometric discrepancy: 0.075

The information below is about IL_8C3A_080

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49460.3

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

7ZW0|1|LA|A|1883
7ZW0|1|LA|A|1884
7ZW0|1|LA|U|1885
7ZW0|1|LA|A|1886
7ZW0|1|LA|A|1887
7ZW0|1|LA|U|1888
7ZW0|1|LA|G|1889
*
7ZW0|1|LA|C|2346
7ZW0|1|LA|U|2347
7ZW0|1|LA|A|2348
7ZW0|1|LA|U|2349

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LF

60S ribosomal protein L3

Chain LS

60S ribosomal protein L17-A

Chain Lg

60S ribosomal protein L31-A