IL_7ZW0_209

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAAUU*ACCA

Length

9 nucleotides

Bulged bases

7ZW0|1|LA|C|3092

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_209 not in the Motif Atlas

Homologous match to IL_8C3A_126

Geometric discrepancy: 0.1086

The information below is about IL_8C3A_126

Detailed Annotation

Major groove minor groove platform with tHH

Broad Annotation

Major groove minor groove platform with tHH

Motif group

IL_14592.1

Basepair signature

cWW-tHH-cWW-L-L

Number of instances in this motif group

4

Unit IDs

7ZW0|1|LA|U|3047
7ZW0|1|LA|A|3048
7ZW0|1|LA|A|3049
7ZW0|1|LA|U|3050
7ZW0|1|LA|U|3051
*
7ZW0|1|LA|A|3091
7ZW0|1|LA|C|3092
7ZW0|1|LA|C|3093
7ZW0|1|LA|A|3094

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LF

60S ribosomal protein L3

Chain LY

60S ribosomal protein L23-A

Chain LZ

60S ribosomal protein L24-A