IL_7ZW0_224

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUA*UUAAGC

Length

9 nucleotides

Bulged bases

7ZW0|1|LA|G|3377

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ZW0_224 not in the Motif Atlas

Homologous match to IL_8C3A_138

Geometric discrepancy: 0.0598

The information below is about IL_8C3A_138

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_84428.1

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

7ZW0|1|LA|G|3328
7ZW0|1|LA|U|3329
7ZW0|1|LA|A|3330
*
7ZW0|1|LA|U|3373
7ZW0|1|LA|U|3374
7ZW0|1|LA|A|3375
7ZW0|1|LA|A|3376
7ZW0|1|LA|G|3377
7ZW0|1|LA|C|3378

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LF

60S ribosomal protein L3

Chain LZ

60S ribosomal protein L24-A

Chain Lg

60S ribosomal protein L31-A