IL_8AGU_023
3D structure
- PDB id
- 8AGU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast RQC complex in state E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGGG*UGCAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8AGU_023 not in the Motif Atlas
- Homologous match to IL_5TBW_023
- Geometric discrepancy: 0.0712
- The information below is about IL_5TBW_023
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_07235.3
- Basepair signature
- cWW-tSH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
8AGU|1|f|G|725
8AGU|1|f|G|726
8AGU|1|f|G|727
8AGU|1|f|G|728
*
8AGU|1|f|U|741
8AGU|1|f|G|742
8AGU|1|f|C|743
8AGU|1|f|A|744
8AGU|1|f|C|745
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L18-A
- Chain O
- 60S ribosomal protein L29
Coloring options: