IL_8B0X_098

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

UCCCAAAG*CA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_11411.1

Basepair signature

cWW-L-cWW-L-L-R-cSH

Number of instances in this motif group

12

Unit IDs

8B0X|1|a|U|1006
8B0X|1|a|C|1007
8B0X|1|a|C|1008
8B0X|1|a|C|1009
8B0X|1|a|A|1010
8B0X|1|a|A|1011
8B0X|1|a|A|1012
8B0X|1|a|G|1013
*
8B0X|1|a|C|1152
8B0X|1|a|A|1153

Current chains

Chain a

23S rRNA

Nearby chains

Chain i

50S ribosomal protein L13

Chain p

50S ribosomal protein L20