IL_8B0X_116

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

8B0X|1|a|U|1556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8B0X_116 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.0427

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

8B0X|1|a|C|1439
8B0X|1|a|U|1440
8B0X|1|a|A|1441
8B0X|1|a|U|1442
*
8B0X|1|a|A|1553
8B0X|1|a|A|1554
8B0X|1|a|A|1555
8B0X|1|a|U|1556
8B0X|1|a|G|1557

Current chains

Chain a

23S rRNA

Nearby chains