IL_8B2L_011
3D structure
- PDB id
- 8B2L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GAC*GACCC
- Length
- 8 nucleotides
- Bulged bases
- 8B2L|1|A3|C|236
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8B2L_011 not in the Motif Atlas
- Geometric match to IL_7ENI_001
- Geometric discrepancy: 0.2828
- The information below is about IL_7ENI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70784.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
8B2L|1|A3|G|174
8B2L|1|A3|A|175
8B2L|1|A3|C|176
*
8B2L|1|A3|G|234
8B2L|1|A3|A|235
8B2L|1|A3|C|236
8B2L|1|A3|C|237
8B2L|1|A3|C|238
Current chains
- Chain A3
- 25S rRNA
Nearby chains
- Chain B3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain D3
- 60S ribosomal protein L13
- Chain V3
- Ribosomal protein L37
- Chain n3
- 60S ribosomal protein L35-like
Coloring options: