IL_8B2L_182
3D structure
- PDB id
- 8B2L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GAUUAAG*CGC
- Length
- 10 nucleotides
- Bulged bases
- 8B2L|1|h1|U|45, 8B2L|1|h1|A|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8B2L_182 not in the Motif Atlas
- Homologous match to IL_4V88_387
- Geometric discrepancy: 0.0975
- The information below is about IL_4V88_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77761.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8B2L|1|h1|G|42
8B2L|1|h1|A|43
8B2L|1|h1|U|44
8B2L|1|h1|U|45
8B2L|1|h1|A|46
8B2L|1|h1|A|47
8B2L|1|h1|G|48
*
8B2L|1|h1|C|435
8B2L|1|h1|G|436
8B2L|1|h1|C|437
Current chains
- Chain h1
- 18S rRNA
Nearby chains
- Chain P1
- 40S ribosomal protein S8
- Chain T1
- 40S ribosomal protein S23
Coloring options: