IL_8BF7_030
3D structure
- PDB id
- 8BF7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- GGGG*CUUAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BF7_030 not in the Motif Atlas
- Geometric match to IL_1GID_008
- Geometric discrepancy: 0.3716
- The information below is about IL_1GID_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
8BF7|1|0|G|880
8BF7|1|0|G|881
8BF7|1|0|G|882
8BF7|1|0|G|883
*
8BF7|1|0|C|893
8BF7|1|0|U|894
8BF7|1|0|U|895
8BF7|1|0|A|896
8BF7|1|0|C|897
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
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