IL_8BGE_139
3D structure
- PDB id
- 8BGE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.11 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 8BGE|1|2|U|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BGE_139 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.1282
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8BGE|1|2|U|605
8BGE|1|2|G|606
8BGE|1|2|A|607
8BGE|1|2|A|608
8BGE|1|2|A|609
8BGE|1|2|U|610
8BGE|1|2|C|611
8BGE|1|2|C|612
*
8BGE|1|2|G|628
8BGE|1|2|A|629
8BGE|1|2|A|630
8BGE|1|2|C|631
8BGE|1|2|U|632
8BGE|1|2|G|633
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain h
- 30S ribosomal protein S4
- Chain l
- 30S ribosomal protein S8
- Chain t
- 30S ribosomal protein S16
- Chain u
- 30S ribosomal protein S17
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