IL_8BH4_143
3D structure
- PDB id
- 8BH4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 8BH4|1|2|U|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BH4_143 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.199
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8BH4|1|2|U|605
8BH4|1|2|G|606
8BH4|1|2|A|607
8BH4|1|2|A|608
8BH4|1|2|A|609
8BH4|1|2|U|610
8BH4|1|2|C|611
8BH4|1|2|C|612
*
8BH4|1|2|G|628
8BH4|1|2|A|629
8BH4|1|2|A|630
8BH4|1|2|C|631
8BH4|1|2|U|632
8BH4|1|2|G|633
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain h
- 30S ribosomal protein S4
- Chain l
- 30S ribosomal protein S8
- Chain t
- 30S ribosomal protein S16
- Chain u
- 30S ribosomal protein S17
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