IL_8BH6_056

3D structure

PDB id

8BH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mature 30S ribosomal subunit from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8BH6_056 not in the Motif Atlas

Geometric match to IL_4V88_464

Geometric discrepancy: 0.2708

The information below is about IL_4V88_464

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65718.1

Basepair signature

cWW-cSH-cWS-cWW-cWW

Number of instances in this motif group

5

Unit IDs

8BH6|1|a|G|1412
8BH6|1|a|C|1413
8BH6|1|a|C|1414
8BH6|1|a|C|1415
*
8BH6|1|a|G|1509
8BH6|1|a|U|1510
8BH6|1|a|A|1511
8BH6|1|a|A|1512
8BH6|1|a|C|1513

Current chains

Chain a

16S ribosomal RNA

Nearby chains