IL_8BH7_026
3D structure
- PDB id
- 8BH7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complex of immature 30S ribosomal subunit with Ribosome maturation factor P (RimP) from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.23 Å
Loop
- Sequence
- GUC*GAAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BH7_026 not in the Motif Atlas
- Geometric match to IL_6DME_002
- Geometric discrepancy: 0.3659
- The information below is about IL_6DME_002
- Detailed Annotation
- 8-nt loop receptor
- Broad Annotation
- Loop-receptor motif
- Motif group
- IL_70784.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
8BH7|1|a|G|605
8BH7|1|a|U|606
8BH7|1|a|C|607
*
8BH7|1|a|G|647
8BH7|1|a|A|648
8BH7|1|a|A|649
8BH7|1|a|A|650
8BH7|1|a|C|651
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain h
- 30S ribosomal protein S8
- Chain q
- 30S ribosomal protein S17
Coloring options: