IL_8BHF_026
3D structure
- PDB id
- 8BHF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGCG*CCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BHF_026 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.1834
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
8BHF|1|A2|C|480
8BHF|1|A2|G|481
8BHF|1|A2|C|482
8BHF|1|A2|G|483
*
8BHF|1|A2|C|673
8BHF|1|A2|C|674
8BHF|1|A2|G|675
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain d1
- 60S ribosomal protein L28
Coloring options: