IL_8BHF_067

3D structure

PDB id

8BHF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUG*CUAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHF|1|A2|C|1686
8BHF|1|A2|U|1687
8BHF|1|A2|G|1688
*
8BHF|1|A2|C|1848
8BHF|1|A2|U|1849
8BHF|1|A2|A|1850
8BHF|1|A2|G|1851

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain D1

Ribosomal protein L18

Chain G1

60S ribosomal protein L21

Chain N1

60S ribosomal protein L27a

Chain O1

60S ribosomal protein L29

Chain t3

60S ribosomal protein L13