IL_8BIP_043
3D structure
- PDB id
- 8BIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUCCG*UGAC
- Length
- 10 nucleotides
- Bulged bases
- 8BIP|1|1|C|1016, 8BIP|1|1|C|1017
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BIP_043 not in the Motif Atlas
- Homologous match to IL_5TBW_043
- Geometric discrepancy: 0.2532
- The information below is about IL_5TBW_043
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_71110.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
8BIP|1|1|G|1013
8BIP|1|1|U|1014
8BIP|1|1|U|1015
8BIP|1|1|C|1016
8BIP|1|1|C|1017
8BIP|1|1|G|1018
*
8BIP|1|1|U|1034
8BIP|1|1|G|1035
8BIP|1|1|A|1036
8BIP|1|1|C|1037
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain LI
- 60S ribosomal protein L10
- Chain LJ
- 60S ribosomal protein L11-B
Coloring options: