IL_8BN3_122
3D structure
- PDB id
- 8BN3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S, ES7s delta, eIF5A, Stm1 containing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 8BN3|1|1|A|3130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BN3_122 not in the Motif Atlas
- Homologous match to IL_5TBW_120
- Geometric discrepancy: 0.0648
- The information below is about IL_5TBW_120
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
8BN3|1|1|A|3103
8BN3|1|1|U|3104
8BN3|1|1|U|3105
8BN3|1|1|A|3106
8BN3|1|1|U|3107
*
8BN3|1|1|A|3127
8BN3|1|1|G|3128
8BN3|1|1|A|3129
8BN3|1|1|A|3130
8BN3|1|1|U|3131
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain L9
- RPL9A isoform 1
- Chain M6
- 60S ribosomal protein L16-A
- Chain Q0
- 60S ribosomal protein L40-A
Coloring options: