IL_8BUU_043
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 8BUU|1|A|U|1079
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8BUU_043 not in the Motif Atlas
- Homologous match to IL_5J7L_282
- Geometric discrepancy: 0.0843
- The information below is about IL_5J7L_282
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
8BUU|1|A|G|1077
8BUU|1|A|A|1078
8BUU|1|A|U|1079
8BUU|1|A|G|1080
*
8BUU|1|A|C|1167
8BUU|1|A|G|1168
8BUU|1|A|C|1169
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
- Chain M
- 50S ribosomal protein L16
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