IL_8C3A_127

3D structure

PDB id

8C3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUUUUG*CGAAG

Length

11 nucleotides

Bulged bases

8C3A|1|1|U|3028, 8C3A|1|1|U|3030

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

UAA/GAN related

Broad Annotation

UAA/GAN related

Motif group

IL_17136.4

Basepair signature

cWW-R-L-tHS-tHW-cWW

Number of instances in this motif group

18

Unit IDs

8C3A|1|1|U|3026
8C3A|1|1|U|3027
8C3A|1|1|U|3028
8C3A|1|1|U|3029
8C3A|1|1|U|3030
8C3A|1|1|G|3031
*
8C3A|1|1|C|3056
8C3A|1|1|G|3057
8C3A|1|1|A|3058
8C3A|1|1|A|3059
8C3A|1|1|G|3060

Current chains

Chain 1

25S

Nearby chains

Chain 7

60S ribosomal protein L24-A

Chain AE

60S ribosomal protein L31-B

Chain k

60S ribosomal protein L3