IL_8C3A_132
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UACGAAUAAG*CGCUGGA
- Length
- 17 nucleotides
- Bulged bases
- 8C3A|1|1|A|3150, 8C3A|1|1|A|3156, 8C3A|1|1|U|3172, 8C3A|1|1|G|3174
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15174.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-cSS-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8C3A|1|1|U|3149
8C3A|1|1|A|3150
8C3A|1|1|C|3151
8C3A|1|1|G|3152
8C3A|1|1|A|3153
8C3A|1|1|A|3154
8C3A|1|1|U|3155
8C3A|1|1|A|3156
8C3A|1|1|A|3157
8C3A|1|1|G|3158
*
8C3A|1|1|C|3169
8C3A|1|1|G|3170
8C3A|1|1|C|3171
8C3A|1|1|U|3172
8C3A|1|1|G|3173
8C3A|1|1|G|3174
8C3A|1|1|A|3175
Current chains
- Chain 1
- 25S
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain AG
- 60S ribosomal protein L33-A
- Chain n
- 60S ribosomal protein L6
- Chain q
- 60S ribosomal protein L9-B
- Chain u
- 60S ribosomal protein L14-B
- Chain w
- Ribosomal protein L13
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