IL_8C3A_150
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- ACGCAGCGAAAUGCGAUACGU*AAUCU
- Length
- 26 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44998.1
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Number of instances in this motif group
- 2
Unit IDs
8C3A|1|4|A|44
8C3A|1|4|C|45
8C3A|1|4|G|46
8C3A|1|4|C|47
8C3A|1|4|A|48
8C3A|1|4|G|49
8C3A|1|4|C|50
8C3A|1|4|G|51
8C3A|1|4|A|52
8C3A|1|4|A|53
8C3A|1|4|A|54
8C3A|1|4|U|55
8C3A|1|4|G|56
8C3A|1|4|C|57
8C3A|1|4|G|58
8C3A|1|4|A|59
8C3A|1|4|U|60
8C3A|1|4|A|61
8C3A|1|4|C|62
8C3A|1|4|G|63
8C3A|1|4|U|64
*
8C3A|1|4|A|96
8C3A|1|4|A|97
8C3A|1|4|U|98
8C3A|1|4|C|99
8C3A|1|4|U|100
Current chains
- Chain 4
- 5.8S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 8
- 60S ribosomal protein L25
- Chain AI
- Ribosomal protein L29
- Chain AK
- 60S ribosomal protein L37-B
- Chain AM
- 60S ribosomal protein L39
Coloring options: