IL_8C3A_189
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8C3A|1|AS|G|904, 8C3A|1|AS|A|916, 8C3A|1|AS|A|917
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C3A_189 not in the Motif Atlas
- Homologous match to IL_8C3A_036
- Geometric discrepancy: 0.0394
- The information below is about IL_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8C3A|1|AS|G|903
8C3A|1|AS|G|904
8C3A|1|AS|G|905
*
8C3A|1|AS|U|915
8C3A|1|AS|A|916
8C3A|1|AS|A|917
8C3A|1|AS|U|918
8C3A|1|AS|C|919
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AW
- 60S ribosomal protein L2-B
- Chain BI
- 60S ribosomal protein L15-A
- Chain BK
- Ribosomal protein L22
- Chain CE
- 60S ribosomal protein L37-B
Coloring options: