IL_8C3A_213
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUUG*CUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C3A_213 not in the Motif Atlas
- Homologous match to IL_8C3A_060
- Geometric discrepancy: 0.0451
- The information below is about IL_8C3A_060
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
8C3A|1|AS|A|1339
8C3A|1|AS|U|1340
8C3A|1|AS|U|1341
8C3A|1|AS|G|1342
*
8C3A|1|AS|C|1354
8C3A|1|AS|U|1355
8C3A|1|AS|U|1356
8C3A|1|AS|U|1357
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AY
- 60S ribosomal protein L4-B
- Chain BA
- 60S ribosomal protein L6
- Chain BB
- 60S ribosomal protein L7-A
- Chain BL
- 60S ribosomal protein L18-A
- Chain BZ
- 60S ribosomal protein L32
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