IL_8C3A_363
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUC*GUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C3A_363 not in the Motif Atlas
- Geometric match to IL_6IA2_004
- Geometric discrepancy: 0.1244
- The information below is about IL_6IA2_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 214
Unit IDs
8C3A|1|B|G|1198
8C3A|1|B|U|1199
8C3A|1|B|C|1200
*
8C3A|1|B|G|1434
8C3A|1|B|U|1435
8C3A|1|B|U|1436
Current chains
- Chain B
- 18S
Nearby chains
- Chain M
- 40S ribosomal protein S10-A
- Chain R
- 40S ribosomal protein S15
- Chain f
- 40S ribosomal protein S29A
- Chain h
- Ubiquitin-40S ribosomal protein S31 fusion protein
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