IL_8C93_062

3D structure

PDB id

8C93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

UUAG*CAAAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8C93_062 not in the Motif Atlas

Homologous match to IL_7A0S_008

Geometric discrepancy: 0.5666

The information below is about IL_7A0S_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15067.1

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

4

Unit IDs

8C93|1|A|U|292
8C93|1|A|U|293
8C93|1|A|A|294
8C93|1|A|G|295
*
8C93|1|A|C|343
8C93|1|A|A|344
8C93|1|A|A|345
8C93|1|A|A|346
8C93|1|A|A|347
8C93|1|A|A|348

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L24