IL_8C95_035
3D structure
- PDB id
- 8C95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM captures early ribosome assembly in action
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.92 Å
Loop
- Sequence
- ACCCC*GAACU
- Length
- 10 nucleotides
- Bulged bases
- 8C95|1|B|C|35
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8C95_035 not in the Motif Atlas
- Homologous match to IL_5J7L_358
- Geometric discrepancy: 0.2946
- The information below is about IL_5J7L_358
- Detailed Annotation
- Symmetric double minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.11
- Basepair signature
- cWW-cSH-cWS-L-tSW-R-R-cWW
- Number of instances in this motif group
- 9
Unit IDs
8C95|1|B|A|34
8C95|1|B|C|35
8C95|1|B|C|36
8C95|1|B|C|37
8C95|1|B|C|38
*
8C95|1|B|G|44
8C95|1|B|A|45
8C95|1|B|A|46
8C95|1|B|C|47
8C95|1|B|U|48
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
Coloring options: