IL_8CRE_276
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAAUU*ACCA
- Length
- 9 nucleotides
- Bulged bases
- 8CRE|1|AS|C|3064, 8CRE|1|AS|C|3065
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRE_276 not in the Motif Atlas
- Homologous match to IL_8C3A_126
- Geometric discrepancy: 0.0552
- The information below is about IL_8C3A_126
- Detailed Annotation
- Major groove minor groove platform with tHH
- Broad Annotation
- Major groove minor groove platform with tHH
- Motif group
- IL_14592.1
- Basepair signature
- cWW-tHH-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
8CRE|1|AS|U|3019
8CRE|1|AS|A|3020
8CRE|1|AS|A|3021
8CRE|1|AS|U|3022
8CRE|1|AS|U|3023
*
8CRE|1|AS|A|3063
8CRE|1|AS|C|3064
8CRE|1|AS|C|3065
8CRE|1|AS|A|3066
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AX
- 60S ribosomal protein L3
- Chain BQ
- 60S ribosomal protein L23-A
- Chain BR
- 60S ribosomal protein L24-A
Coloring options: