IL_8CRX_025
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CGUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_025 not in the Motif Atlas
- Homologous match to IL_4LFB_023
- Geometric discrepancy: 0.1045
- The information below is about IL_4LFB_023
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.2
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
8CRX|1|A|C|562
8CRX|1|A|G|563
8CRX|1|A|U|564
8CRX|1|A|A|565
8CRX|1|A|G|566
*
8CRX|1|A|U|739
8CRX|1|A|G|740
8CRX|1|A|A|741
8CRX|1|A|G|742
8CRX|1|A|G|743
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain H
- 30S ribosomal protein S8
- Chain L
- 30S ribosomal protein S12
- Chain O
- 30S ribosomal protein S15
- Chain Q
- 30S ribosomal protein S17
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: