IL_8CRX_053
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UACAGAG*CGGAAAG
- Length
- 14 nucleotides
- Bulged bases
- 8CRX|1|A|G|1272
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_053 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.0978
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
8CRX|1|A|U|1233
8CRX|1|A|A|1234
8CRX|1|A|C|1235
8CRX|1|A|A|1236
8CRX|1|A|G|1237
8CRX|1|A|A|1238
8CRX|1|A|G|1239
*
8CRX|1|A|C|1270
8CRX|1|A|G|1271
8CRX|1|A|G|1272
8CRX|1|A|A|1273
8CRX|1|A|A|1274
8CRX|1|A|A|1275
8CRX|1|A|G|1276
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain I
- 30S ribosomal protein S7
- Chain J
- 30S ribosomal protein S9
- Chain M
- 30S ribosomal protein S10
- Chain S
- 30S ribosomal protein S14 type Z
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