IL_8CRX_063
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_063 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.2412
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_51313.1
- Basepair signature
- cWW-L-R-L-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
8CRX|1|A|C|1417
8CRX|1|A|C|1418
8CRX|1|A|G|1419
8CRX|1|A|A|1420
8CRX|1|A|A|1421
8CRX|1|A|G|1422
*
8CRX|1|A|C|1453
8CRX|1|A|G|1454
8CRX|1|A|A|1455
8CRX|1|A|A|1456
8CRX|1|A|G|1457
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain T
- 30S ribosomal protein S20
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain o
- 50S ribosomal protein L19
Coloring options: