IL_8CRX_090
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8CRX|1|a|G|861, 8CRX|1|a|A|873, 8CRX|1|a|A|874, 8CRX|1|a|U|875
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_090 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.0866
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8CRX|1|a|G|860
8CRX|1|a|G|861
8CRX|1|a|G|862
*
8CRX|1|a|C|872
8CRX|1|a|A|873
8CRX|1|a|A|874
8CRX|1|a|U|875
8CRX|1|a|C|876
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
- Chain c
- 50S ribosomal protein L2
- Chain e
- 50S ribosomal protein L4
- Chain r
- 50S ribosomal protein L22
Coloring options: