IL_8CRX_173
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GAUAAC*GGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 8CRX|1|a|A|2947
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_173 not in the Motif Atlas
- Homologous match to IL_7A0S_098
- Geometric discrepancy: 0.0938
- The information below is about IL_7A0S_098
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
8CRX|1|a|G|2919
8CRX|1|a|A|2920
8CRX|1|a|U|2921
8CRX|1|a|A|2922
8CRX|1|a|A|2923
8CRX|1|a|C|2924
*
8CRX|1|a|G|2944
8CRX|1|a|G|2945
8CRX|1|a|A|2946
8CRX|1|a|A|2947
8CRX|1|a|G|2948
8CRX|1|a|C|2949
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L36
- Chain g
- 50S ribosomal protein L6
- Chain i
- 50S ribosomal protein L13
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