IL_8CRX_185

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGAU*GGUUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRX_185 not in the Motif Atlas

Geometric match to IL_1HYS_004

Geometric discrepancy: 0.3193

The information below is about IL_1HYS_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_64231.5

Basepair signature

cWW-cWW-L-R-L-cWW

Number of instances in this motif group

11

Unit IDs

8CRX|1|A|G|982
8CRX|1|A|G|983
8CRX|1|A|A|984
8CRX|1|A|U|985
*
8CRX|1|A|G|1024
8CRX|1|A|G|1025
8CRX|1|A|U|1026
8CRX|1|A|U|1027
8CRX|1|A|C|1028

Current chains

Chain A

RNA (1537-MER)

Nearby chains

Chain G

30S ribosomal protein S3