IL_8CRX_186
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- G(4OC)C(5MC)*G(UR3)AAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4OC, 5MC, UR3
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_186 not in the Motif Atlas
- Homologous match to IL_5J7L_059
- Geometric discrepancy: 0.0735
- The information below is about IL_5J7L_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.4
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
8CRX|1|A|G|1388
8CRX|1|A|4OC|1389
8CRX|1|A|C|1390
8CRX|1|A|5MC|1391
*
8CRX|1|A|G|1484
8CRX|1|A|UR3|1485
8CRX|1|A|A|1486
8CRX|1|A|A|1487
8CRX|1|A|C|1488
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain C
- Transfer RNA; tRNA
- Chain X
- 30S ribosomal protein bS22
- Chain Y
- 32MF mRNA
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: