IL_8CWO_031
3D structure
- PDB id
- 8CWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, body domain only in the local refined map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.84 Å
Loop
- Sequence
- GGAAUU*AGGAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CWO_031 not in the Motif Atlas
- Geometric match to IL_4LFB_030
- Geometric discrepancy: 0.0599
- The information below is about IL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
8CWO|1|A|G|655
8CWO|1|A|G|656
8CWO|1|A|A|657
8CWO|1|A|A|658
8CWO|1|A|U|659
8CWO|1|A|U|660
*
8CWO|1|A|A|694
8CWO|1|A|G|695
8CWO|1|A|G|696
8CWO|1|A|A|697
8CWO|1|A|A|698
8CWO|1|A|C|699
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain F
- 30S ribosomal protein S6
- Chain K
- 30S ribosomal protein S11
- Chain R
- 30S ribosomal protein S18
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