IL_8E5T_029
3D structure
- PDB id
- 8E5T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UGAUA*UUAA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8E5T_029 not in the Motif Atlas
- Geometric match to IL_8C3A_009
- Geometric discrepancy: 0.3695
- The information below is about IL_8C3A_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90170.1
- Basepair signature
- cWW-L-R-L-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
8E5T|1|3|U|30
8E5T|1|3|G|31
8E5T|1|3|A|32
8E5T|1|3|U|33
8E5T|1|3|A|34
*
8E5T|1|3|U|45
8E5T|1|3|U|46
8E5T|1|3|A|47
8E5T|1|3|A|48
Current chains
- Chain 3
- ITS2 ribosomal RNA
Nearby chains
- Chain K
- Proteasome-interacting protein CIC1
- Chain o
- Ribosome biogenesis protein 15
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