IL_8ETI_001
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CC*GUG
- Length
- 5 nucleotides
- Bulged bases
- 8ETI|1|2|U|159
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_001 not in the Motif Atlas
- Homologous match to IL_8C3A_002
- Geometric discrepancy: 0.538
- The information below is about IL_8C3A_002
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.13
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 40
Unit IDs
8ETI|1|1|C|7
8ETI|1|1|C|8
*
8ETI|1|2|G|158
8ETI|1|2|U|159
8ETI|1|2|G|160
Current chains
- Chain 1
- RNA (1564-MER)
- Chain 2
- RNA (152-MER)
Nearby chains
- Chain G
- 60S ribosomal protein L8
- Chain N
- 60S ribosomal protein L15-A
- Chain X
- 60S ribosomal protein L25-A
- Chain n
- Pescadillo homolog
Coloring options: