IL_8ETI_011
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGACG*UGGAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_011 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.3114
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
8ETI|1|1|A|181
8ETI|1|1|G|182
8ETI|1|1|A|183
8ETI|1|1|C|184
8ETI|1|1|G|185
*
8ETI|1|1|U|247
8ETI|1|1|G|248
8ETI|1|1|G|249
8ETI|1|1|A|250
8ETI|1|1|U|251
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain L
- 60S ribosomal protein L13
- Chain h
- 60S ribosomal protein L35
- Chain v
- Nucleolar protein 16
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