IL_8ETI_034
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUAAG*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 8ETI|1|1|U|1362
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_034 not in the Motif Atlas
- Homologous match to IL_8C3A_051
- Geometric discrepancy: 0.1317
- The information below is about IL_8C3A_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
8ETI|1|1|U|1198
8ETI|1|1|U|1199
8ETI|1|1|A|1200
8ETI|1|1|A|1201
8ETI|1|1|G|1202
*
8ETI|1|1|C|1359
8ETI|1|1|C|1360
8ETI|1|1|A|1361
8ETI|1|1|U|1362
8ETI|1|1|A|1363
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain F
- 60S ribosomal protein L7-B
- Chain e
- 60S ribosomal protein L32-A
- Chain f
- 60S ribosomal protein L33-B
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