IL_8ETI_066
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGUAAG*CUGAG
- Length
- 11 nucleotides
- Bulged bases
- 8ETI|1|1|G|3470
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_066 not in the Motif Atlas
- Homologous match to IL_8C3A_139
- Geometric discrepancy: 0.2033
- The information below is about IL_8C3A_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83162.8
- Basepair signature
- cWW-cWW-tSH-cWW-tHH-L
- Number of instances in this motif group
- 4
Unit IDs
8ETI|1|1|U|3433
8ETI|1|1|G|3434
8ETI|1|1|U|3435
8ETI|1|1|A|3436
8ETI|1|1|A|3437
8ETI|1|1|G|3438
*
8ETI|1|1|C|3468
8ETI|1|1|U|3469
8ETI|1|1|G|3470
8ETI|1|1|A|3471
8ETI|1|1|G|3472
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain B
- 60S ribosomal protein L3-A
- Chain u
- Ribosome biogenesis protein rlp24
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