IL_8ETI_067
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 8ETI|1|2|G|103
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_067 not in the Motif Atlas
- Homologous match to IL_5TBW_145
- Geometric discrepancy: 0.2083
- The information below is about IL_5TBW_145
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
8ETI|1|2|U|72
8ETI|1|2|A|73
8ETI|1|2|A|74
*
8ETI|1|2|U|101
8ETI|1|2|C|102
8ETI|1|2|G|103
8ETI|1|2|A|104
Current chains
- Chain 2
- RNA (152-MER)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y
- 60S ribosomal protein L26
- Chain h
- 60S ribosomal protein L35
- Chain j
- 60S ribosomal protein L37-B
- Chain v
- Nucleolar protein 16
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